class: center, middle, inverse, title-slide # Open Science Updates ### <a href="mailto:mbeck@tbep.org">Dr. Marcus Beck</a> <span class="math inline">•</span> <a href="https://twitter.com/fawda123">@fawda123</a> <span class="math inline">•</span> <a href="https://twitter.com/hashtag/TampaBayOpenSci?src=hashtag_click">#TampaBayOpensci</a> ### Tampa Bay Estuary Program ### 2/2/2021 --- class: top, left .center[ ## Subcommittee roles and responsibilities ] 1. Support development of open science products at TBEP 1. Rank priority research areas for developing open science products 1. Facilitate training activities .center[[Guiding Document](https://docs.google.com/document/d/1w6dVTwfYYDRVzGPXy0jyHxV4mwOutEY_ISMP1oAdZ_c/edit)] --- class: top, center ## RESOURCES WEB PAGE [https://tbep-tech.github.io/](https://tbep-tech.github.io/) <img src="figure/resources.PNG" width="80%" style="display: block; margin: auto;" /> --- class: top, center ## CREATING GITHUB ISSUES [https://github.com/tbep-tech/tbep-tech.github.io/issues/new/choose](https://github.com/tbep-tech/tbep-tech.github.io/issues/new/choose) * Go here to add to the resources tab <img src="figure/issues.PNG" width="100%" style="display: block; margin: auto;" /> --- class: top, center ## DATA MANAGEMENT SOP [https://tbep-tech.github.io/data-management-sop/](https://tbep-tech.github.io/data-management-sop/) * Currently drafting, provide your feedback! <img src="figure/datamanage.PNG" width="100%" style="display: block; margin: auto;" /> --- class: top, center ## SEAGRASS TRANSECT DASHBOARD [https://shiny.tbep.org/seagrasstransect-dash/](https://shiny.tbep.org/seagrasstransect-dash/) * Completed, but looking for feedback! <img src="figure/seagrasstransdash.PNG" width="100%" style="display: block; margin: auto;" /> --- class: top, left ## DISCUSSION ITEMS * IT support/long-term maintenance * Problem: OS software typically doesn't have dedicated IT staff or professional support that other platforms offer * Problem: OS developers have no incentive to follow best practices for software dev * But see [https://ropensci.org/](https://ropensci.org/) <img src="figure/softwaretradeoff.png" width="100%" style="display: block; margin: auto;" /> --- class: top, left ## DISCUSSION ITEMS * R package dependencies * Problem: Software continues to develop, risking backwards incompatibility * Problem: R is a complex network of dependencies, making the entire system vulnerable to deprecation * Resources for addressing the problem: [groundhog](http://datacolada.org/95), [renv](https://rstudio.github.io/renv/index.html) * Also be aware the top developers are thinking about this problem... --- class: top, left .center[ ## 2021 MEETINGS ] * Upcoming meetings * May 4: Developing the Peconic Estuary Assessment Framework, Sarah Schaeffer (PEP), Gerold Morrison (CWP) * Aug 3 * Nov 2 * Soliciting speakers, send us ideas! --- class: top, left .center[ ## 2021 TRAINING ] * Feb 9th [Shiny training](https://tbep-tech.github.io/tbep-r-training/shiny.html) - FWRI R club * March [NERRS R trainings](https://tbep-tech.github.io/ecometab-r-training/) - open invite * BASIS workshop Oct. 2021 * CERF workshop Nov. 2021