class: center, middle, inverse, title-slide # Open Science Data Discussion: Red Tide Impact and Response Assessment for Tampa and Sarasota Bay Region ### <a href="mailto:marcusb@sccwrp.org">Dr. Marcus Beck</a> <span class="math inline">•</span> <a href="https://twitter.com/fawda123">@fawda123</a> <span class="math inline">•</span> <a href="https://twitter.com/hashtag/TampaBayOpenSci?src=hashtag_click">#TampaBayOpensci</a> ### Tampa Bay Estuary Program ### 2/21/2020 --- class: middle, center, inverse # The scientific process --- class: middle, center <img src="figure/scipro.png" width="90%" /> --- class: middle, center, inverse # Scientist: "My 500 page report will answer all their questions!" --- class: middle, center, inverse # Manager: "This 500 page report does not answer any of my questions!" --- class: middle, center ## The research-management divide <img src="figure/divide2.png" width="100%" /> --- class: middle, center <img src="figure/michener.png" width="90%" /> .footnote[Michener et al. 1997 Ecol. App. 7(1):330-342.] --- class: middle, center ## Open science can bridge this divide <img src="figure/bridge.png" width="100%" /> --- class: middle, center ### The practice of science in such a way that others can **collaborate** and **contribute**, where research data, lab notes and other research processes are **freely available**, under terms that enable **reuse**, **redistribution** and **reproduction** of the research and its underlying data and methods .footnote[Open Knowledge International, [http://opendefinition.org/](http://opendefinition.org/), [https://creativecommons.org/](https://creativecommons.org/about/program-areas/open-science/)] --- class: middle, center # <i class="fas fa-table "></i> Open data # <i class="fas fa-cogs "></i> Open process # <i class="fas fa-book "></i> Open products --- class: middle, center, inverse # A TBEP example --- class: top, center ## WATER QUALITY REPORT CARD .pull-left[ <img src="figure/wqstatic1.PNG" width="100%" /> ] .pull-right[ <img src="figure/wqstatic2.PNG" width="100%" /> ] --- class: top, center ## WATER QUALITY DASHBOARD <img src="figure/wqdash2.PNG" width="100%" /> [https://shiny.tbeptech.org/wq-dash/](https://shiny.tbeptech.org/wq-dash/) --- class: top, center ## THE OLD (closed) WAY <img src="figure/badflow2.png" width="100%" /> --- class: top, center ## THE NEW (open) WAY <img src="figure/flow3.png" width="100%" /> --- class: middle, center, inverse # Open data have a *life history*, are *unaltered*, *machine-readable*, and *readily available*! -- # (versus the Excel file you're sitting on) --- class: middle, center, inverse # *Discoverable* products - the Internet can find it! -- # = *collaboration* .footnote[e.g., https://www.dataone.org/, https://knb.ecoinformatics.org/] --- class: middle, center, inverse # What if my data are sensitive? --- class: top, center # Dealing with sensitive data: ## - Anonymize or generalize information with readily-available tools -- ## - Don't be open when it's impractical! -- ## - Or just embrace the openness.. --- class: center, middle, inverse # What about red tide applications? --- class: middle, center # Project goals ## 1) Develop a regionally-coordinated, standardized red tide impact assessment method ## 2) Evaluate and make recommendations for optimizing response efforts --- class: middle, center # Project goals ## 1) Develop a regionally-coordinated, standardized red tide impact assessment method ### - Identify priority metrics ### - Link metrics to data ### - Develop analysis workflow (inputs/outputs, data dictionary, metadata) --- class: middle, center # Project goals ## 2) Evaluate and make recommendations for optimizing response efforts ### - Allow for open communication ### - Coordinate efforts and minimize redundancies ### - An online decision-support tool? --- class: middle, center, inverse # A terrifying but relevant example --- class: top, center ## [Coronavirus daily updated dashboard](https://gisanddata.maps.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6) <img src="figure/coronadash.PNG" width="100%" />