Plot a matrix of Tampa Bay Benthic Index scores over time by bay segment

Usage

show_tbbimatrix(
  tbbiscr,
  bay_segment = c("HB", "OTB", "MTB", "LTB", "TCB", "MR", "BCB", "All", "All (wt)"),
  yrrng = c(1993, 2023),
  alph = 1,
  txtsz = 3,
  family = NA,
  rev = FALSE,
  position = "top",
  plotly = FALSE,
  width = NULL,
  height = NULL
)

Arguments

tbbiscr: input data frame as returned by anlz_tbbiscr
bay_segment: chr string for the bay segment, one to many of "HB", "OTB", "MTB", "LTB", "TCB", "MR", "BCB", "All", "All (wt)"
yrrng: numeric indicating year ranges to evaluate
alph: numeric indicating alpha value for score category colors
txtsz: numeric for size of text in the plot
family: optional chr string indicating font family for text labels
rev: logical if factor levels for bay segments are reversed
position: chr string of location for bay segment labels, default on top, passed to scale_x_discrete
plotly: logical if matrix is created using plotly
width: numeric for width of the plot in pixels, only applies of plotly = TRUE
height: numeric for height of the plot in pixels, only applies of plotly = TRUE

Value

A ggplot object showing trends over time in TBBI scores for each bay segment if plotly = FALSE, otherwise a plotly object

Details

Additional summaries are provided for the entire bay, as a summary across categories ("All") and a summary weighted across the relative sizes of each bay segment ("All (wt)").

Examples

tbbiscr <- anlz_tbbiscr(benthicdata)
show_tbbimatrix(tbbiscr)