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All functions

anlz_attainpep()
Get attainment categories
anlz_dodlypep()
Analyze daily DO values relative to threshold
anlz_domopep()
Analyze monthly DO values relative to threshold
anlz_entpep()
Count beach exceedances for enterococcus
anlz_medpep()
Estimate annual medians
beaches
Bathing beaches
dodat
Dissolved oxygen data for USGS stations
entdat
Raw beach pathogen data from Suffolk County
pepseg
Polygon shapefile of segment boundaries
pepstations
Bay stations by segment
peptargets
Bay segment targets
rawdat
Raw data from Suffolk County
read_pepdo()
Import dissolved oxygen data
read_pepent()
Import raw enterococcus data
read_pepwq()
Import raw water quality data
show_allthrpep()
Plot annual water quality value and thresholds for all segments
show_boxpep()
Plot monthly chlorophyll, secchi, or tn values values for a segment
show_domatrix()
Create a colorized table for reporting dissolved oxygen data by site
show_entmatrix()
Create a colorized table for beach pathogen exceedances
show_matrixpep()
Create a colorized table for indicator reporting
show_plotlypep()
Plot chlorophyll and secchi data together with matrix outcomes
show_reactablepep()
Create reactable table from matrix data
show_segmatrixpep()
Create a colorized table for water quality outcomes and exceedances by segment
show_sitemappep()
Map water quality data for a selected year
show_thrpep()
Plot annual water quality value and thresholds for a segment
show_wqmatrixpep()
Create a colorized table for chlorophyll or secchi exceedances