Package index • peptools

All functions

anlz_attainpep(): Get attainment categories

anlz_dodlypep(): Analyze daily DO values relative to threshold

anlz_domopep(): Analyze monthly DO values relative to threshold

anlz_entpep(): Count beach exceedances for enterococcus

anlz_medpep(): Estimate annual medians

beaches: Bathing beaches

dodat: Dissolved oxygen data for USGS stations

entdat: Raw beach pathogen data from Suffolk County

pepseg: Polygon shapefile of segment boundaries

pepstations: Bay stations by segment

peptargets: Bay segment targets

rawdat: Raw water quality data from Suffolk County

read_pepdo(): Import dissolved oxygen data

read_pepent(): Import raw enterococcus data

read_pepwq(): Import raw water quality data

show_allthrpep(): Plot annual water quality value and thresholds for all segments

show_boxpep(): Plot monthly chlorophyll, secchi, or tn values values for a segment

show_domatrix(): Create a colorized table for reporting dissolved oxygen data by site

show_entmatrix(): Create a colorized table for beach pathogen exceedances

show_matrixpep(): Create a colorized table for indicator reporting

show_plotlypep(): Plot chlorophyll and secchi data together with matrix outcomes

show_reactablepep(): Create reactable table from matrix data

show_segmatrixpep(): Create a colorized table for water quality outcomes and exceedances by segment

show_sitemappep(): Map water quality data for a selected year

show_thrpep(): Plot annual water quality value and thresholds for a segment

show_wqmatrixpep(): Create a colorized table for chlorophyll or secchi exceedances