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Added show_tbniscrseas() to plot seasonal (monthly) Tampa Bay Nekton Index results for a single bay segment and year, with boxplots of site-level values overlaid with jittered points, the same red/yellow/green perc score category background as show_tbniscr() when plotting the TBNI score, and plotly tooltips showing station
Added show_ambitab() and show_ambitrend() , and AMBI/AMBI-TB background and examples in the TBBI vignette
Added anlz_splitdata() , anlz_splitsorms(), and show_splitbarplot() for summarizing data by period/storm splits
Added read_importsealevels() and the sealevelstations dataset for NOAA sea level data, with vignette content
Added read_importprism() and read_prism_rasters() for PRISM climate data
Added read_importwqwin() and util_importwqwin() to retrieve water quality data from the FDEP WIN API
Added read_importwqwa() and util_importwqwa() to retrieve Water Atlas data and metadata from its API, with vignette content
Added util_rain() to replace the retired rnoaa package as a precipitation data source for anlz_hydroload()
Added exceed_rate to anlz_fibmatrix() as a continuous analog to the letter grade scores
Added the dbasin dataset and an experimental drainage-basin mapping option to show_fibmatmap() , including a bayseg list-output enhancement
Added extend and covlab arguments to show_seagrasscoverage()
Added retry with exponential backoff to read_importwqp() (via new util_importwqp() ) and read_transect() for intermittent request failures
show_boxplot() now plots points for the current year on top of other years
show_hmpreport() legend and symbol sizing options improved for two-column output
Fixed show_transect() to use the maximum value, rather than erroring, when more than one macroalgae species is recorded at the same meter mark
Fixed a bug in seagrass transect date assignment that could create duplicate dates within the same year
Fixed show_matrixplotly() and show_ratab() (for compatibility with dplyr/ggplot2 updates and 2024 results)
Fixed show_fibmatmap() issues with listout and non-baywide output
Replaced the deprecated size argument with linewidth for line-based ggplot2 geoms (geom_line() , geom_hline() , geom_vline() , geom_segment() , geom_sf() ) across all plotting functions, and updated the default font family for compatibility with current ggplot2
Removed mapview from Suggests; replaced mapview() examples in the seagrass transect, TBNI, TBBI, and tidal creeks vignettes with leaflet() using the ESRI World Gray Canvas basemap
Removed the rnoaa, stringr, scales, and units dependencies and native pipe usage for improved R CMD check compliance; bumped the minimum required R version
Updated EPC download endpoints for water quality, FIB, plankton, and benthic (base tables and results) data following changes to EPC’s SharePoint hosting
Updated the Water Atlas seagrass transect API endpoints
fimdata, fimstations, epcdata, phytodata, benthicdata, sedimentdata, transect, seagrass, tidalcreeks, iwrraw, catchprecip, and county FIB/enterococcus datasets updated with 2024 and 2025 results
Added tbsegdetailbcbs and swfwmdtbseg2024 spatial datasets; updated acres (2023 LULC) and subtacres
show_matrixplotly() now uses automargin = T for complete x-axis text display
Improved URL stability for nekton index ancillary file downloads
Added tbsegdetail dataset for detailed bay segment polygons
Updated read_formphyto() for correct taxa grouping for diatoms
phytodata, epcdata, transect, seagrass, iwrraw, tidalcreeks data updated for 2024
benthicdata, sedimentdata data updated for 2023
show_sitesegmep() correctly drops segments not shown from legend; segment label display option added
show_sitemap() now has angled axis text; segment label option added
read_formphyto() default arguments updated for source data changes
show_boxplot() now has option to remove jittered points and outliers using points argument
lastlab argument in show_seagrasscoverage() is now logical
show_ratab() font changed to Arial for PDF Quarto render compatibility
Chaetomorpha genus option added to seagrass transect functions
show_hmpreport() now has option to remove total intertidal column
trnlns updated to include bay segment column
anlz_transectave() now uses All instead of Tampa Bay
FIB reporting functions overhauled; Enterococcus and E. coli used exclusively for marine/freshwater stations; expanded county data inclusion
targets object updated with values for Boca Ciega Bay, Terra Ceia Bay, and Manatee River
All data objects updated with current data
Added HMP reporting functions and vignette
Added sediment functions and vignette for benthic data
Added show_seagrasscoverage() function
SWFWMD Tampa Bay segment spatial object added
all argument added to read_importwq() and read_formwq() to return all parameters
Added FIB reporting functions and vignette (EPC and baywide)
Added functions and vignette content supporting reasonable assurance reporting
Mockery used for testing with web requests when able
Numerous bug fixes and minor feature additions
KC added as author
Consistent color scheme established across all report cards (red, yellow, green, light blue, dark orange, brown)
benthicdata updated with 2020 results; default arguments changed to 2020
Updated download paths for read_importwq and read_importbenthic following EPCHC platform migration
CITATION file added
Turbidity and color added as output from read_formwq()
Added width and height arguments to show_ functions creating plotly output
Legend title fix in show_segplotly()
Added family argument for text family to show_tbniscr()
Output factor order of bay segments in anlz_tbbimed() changed
Global font changes to show_thrplot() and show_boxplot()
Added size argument to show_tdlcrkmatrix()
transect object updated with 2021 results; default year arguments changed
Added sppcol argument for color in show_transect() ; Caulerpa default color changed
All default arguments with 2019 updated to 2021
trnpts and trnlns data objects updated
All plotly objects default download option set to SVG
Updated URL download locations for all EPC data
Removed read_chkdate; simplified EPC file import workflow
Added raw argument to read_transect() for unformatted transect results
Functions organized by concept on reference website
anlz_tdlcrkindic() updated to include DO saturation exceedances
seagrass data object includes 2020 estimates
yrrng argument in show_matrix() defaults to input data range
Added show_tdlcrkradar() plot function
Added radar argument to anlz_tdlcrkindic() for show_tdlcrkradar() output specification
Package dependencies reduced for R CMD check compliance
tidalcreeks and iwrraw data updated for IWR run 61
Training year returned for multiple years in read_formtransect()
Added yr argument to show_compplot() for training year selection
fimdata and fimstations updated with 2020 results
Minor bug fixes for read_formfim() bay segment assignments
Benthic data import/formatting no longer uses RODBC; now uses zipped CSV files
benthicdata updated with 2019 results
Added sgseg and sgmanagement objects for seagrass boundaries